BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F07LP1|AL428941
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1552 1584 0.0
>3x_Contig1552
Length = 11268
Score = 1584 bits (799), Expect = 0.0
Identities = 831/837 (99%), Gaps = 5/837 (0%)
Strand = Plus / Minus
Query: 2 gccggatatatctggaatcctttcttgcattttgatttccgacttttattagtgctgact 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 gccggatatatctggaatcctttcttgcattttgatttccgacttttattagtgctgact 2970
Query: 62 cgaagagacacgcagtggnaccggggtgatgacgttcgcatttagagtcacgtgaatata 121
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 cgaagagacacgcagtgggaccggggtgatgacgttcgcatttagagtcacgtgaatata 2910
Query: 122 tcgctatgtacgcaacaattttttttttcttccaacagaattgtgtatgtgtgcatctct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 tcgctatgtacgcaacaattttttttttcttccaacagaattgtgtatgtgtgcatctct 2850
Query: 182 cctctttctagtttggttttcacatggcggaggcaagattctccacttggtgtgtagatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2849 cctctttctagtttggttttcacatggcggaggcaagattctccacttggtgtgtagatt 2790
Query: 242 ttcttgttaaacagtcacgtgaatatccgagaaatcggtcctttgtctcatataccggaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 ttcttgttaaacagtcacgtgaatatccgagaaatcggtcctttgtctcatataccggaa 2730
Query: 302 aaacgaaaagttatcatgaaaactaaacttcgagaacaataat--taggctttataaaac 359
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 2729 aaacgaaaagttatcatgaaaactaaac-tcgagaacaataattataggctttataaaac 2671
Query: 360 gaaattccactttgagttaacaatatgaaaatgcagtttcctagtagtagaaaatagtta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2670 gaaattccactttgagttaacaatatgaaaatgcagtttcctagtagtagaaaatagtta 2611
Query: 420 gatataccttgaaactgaaaatgatgtggtagtattgtcttttgaaatataatggcgaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2610 gatataccttgaaactgaaaatgatgtggtagtattgtcttttgaaatataatggcgaat 2551
Query: 480 agcatcacaccagtgacagttcacattcgctttttgacagttgacgactgcatctgtgtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2550 agcatcacaccagtgacagttcacattcgctttttgacagttgacgactgcatctgtgtt 2491
Query: 540 tgttttccgaagtcatgatgaaaacctaaacatctccctgttgccctctaatcctctgaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2490 tgttttccgaagtcatgatgaaaacctaaacatctccctgttgccctctaatcctctgaa 2431
Query: 600 cggtattcttgcatgattgaaaaatacgta-tgtattctttcagttcagaacttgtcgtt 658
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 2430 cggtattcttgcatgattgaaaaatacgtagtgtatt-tttcagttcagaacttgtcgtt 2372
Query: 659 tgagtctcaggaatatgtaccatgtagagaaatataaagcaaagatacattacattgtgg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 tgagtctcaggaatatgtaccatgtagagaaatataaagcaaagatacattacattgtgg 2312
Query: 719 accagctcaagttttcttgacaatactgaggttacggaagatagtgttgtggatgaggaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 accagctcaagttttcttgacaatactgaggttacggaagatagtgttgtggatgaggaa 2252
Query: 779 ttacttttgacctgttggaatcaatcaaagttttcgaaagaaatgctgaattaattc 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 ttacttttgacctgttggaatcaatcaaagttttcgaaagaaatgctgaattaattc 2195
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8355
Number of Sequences: 1807
Number of extensions: 8355
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)